So i think the "deepest caves" could be judged in two ways:
[list type=decimal]
[*]the maximum vertical extend of continuous natural formation
[*]the maximum depth accessible below the entrance/highest point [/list]
My current list uses option (2), admittedly missing a lot of deep mines that intersect some cave. After some further consideration i think option (1) is more appropriate.
This is trickier however because, where caves also have a significant portion of mine connecting, a keen understanding of the natural development is required. For example, the highest natural in the known Peak Speedwell system is the top of Horne's Gulley in Titan. This connects to Main Rising (the deepest point) through entirely natural development. It is 29m below the entrance of JH, so therefore reduces the judged depth to 239m.
Before i start to update the list I'd be interested in other people's thoughts regarding this approach.